Publications

2009 | 2008 |  2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999

Whitehouse I, Tsukiyama T.

Opening Windows to the Genome

Cell 2009, 137: 400-402

Vincent JA, Kwong T, Tsukiyama T.

ATP-dependent chromatin remodeling shapes the DNA replication landscape.

Nat Struct Mol Biol 2008, 15: 477-484

Whitehouse I, Rando OJ, Delrow J, Tsukiyama T.

Chromatin remodelling at promoters suppress antisense transcription.

Nature 2007, 450:1031-1036.

Lindstrom KC, Vary JC Jr, Parthun MR, Delrow J, Tsukiyama T.

Isw1 functions in parallel with the NuA4 and Swr1 complexes in stress- induced gene repression.

Mol Cell Biol. 2006, Aug;26 16: 6117-29.

 

Whitehouse I, Tsukiyama T.

Antagonistic forces that position nucleosomes in vivo.

Nat Struct Mol Biol., 2006, Jul; 13 7: 633-40.

 

Tsukiyama, T. and Parkhurst, S.

Chromosomes and expression mechanisms. (editorial overview)

Curr. Opin. Genet. Dev., 2006, 16: 101-103

 

Fazzio TG, Gelbart ME, and Tsukiyama T.

Two Distinct Mechanisms of Chromatin Interaction by the Isw2 Chromatin Remodeling Complex In Vivo

Mol. Cell. Biol. 2005, 25: 9165-9174

 

Gelbart ME, Bachman N, Delrow J, Boeke JD, and Tsukiyama T.

Genome-wide identification of Isw2 chromatin-remodeling targets by localization of a catalytically inactive mutant.

Genes Dev. 2005, 19: 942-954.  Supplemental data

 

Bachman N, Gelbart ME, Tsukiyama T, and Boeke JD.

TFIIIB subunit of Bdp1 is required for periodic integration of the Ty1 retrotransposon and targeting of Isw2p to S. cerevisiae tDNAs.

Genes Dev. 2005, 19: 955-964.

 

McConnell AD, Gelbart ME, Tsukiyama T.

Histone fold protein Dls1p is required for Isw2-dependent chromatin remodeling in vivo.

Mol Cell Biol 2004, 24:2605-2613.  Supplemental data

 

Vary JC, Fazzio TG, Tsukiyama T

Assembly of yeast chromatin using ISWI complexes.

Meth Enzymol 2004, 375:88-102.

 

Fazzio TG, Tsukiyama T.

Chromatin remodeling in vivo: Evidence for a nucleosome sliding mechanism.

Mol Cell 2003, 12:1333-1340.

 

Moreau J-L, Lee M, Mahachi N, Vary JC Jr, Mellor J, Tsukiyama T, Goding CR.

Regulated displacement of TBP from the PHO8 promoter in vivo requires Cbf1 and the Isw1 chromatin remodeling complex.

Mol Cell 2003, 11:1609-1620.

 

Vary JC Jr, Gangaraju VK, Qin J, Landel CC, Kooperberg C, Bartholomew B, Tsukiyama T.

Yeast Isw1p forms two separable complexes in vivo.

Mol Cell Biol 2003, 23:80-91.   Supplemental data

 

Kassabov SR, Henry NM, Zofall M, Tsukiyama T, Bartholomew B.

High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2.

Mol Cell Biol 2002, 22:7524-34.

 

Tsukiyama, T.

The in vivo functions of ATP-dependent chromatin-remodelling factors.

Nat Rev Mol Cell Biol 2002, 3:422-429.

 

Kooperberg C, Fazzio TG, Tsukiyama T.

Improved background correction for spotted DNA microarrays.

J. Comp Biol 2002, 9:55-66.

 

Fazzio, TG, Kooperberg C, Goldmark JP, Neal C, Basom R, Delrow J, Tsukiyama T.

Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression.

Mol Cell Biol 2001, 21:6450-6460.

 

* Correction for the above paper; on page 6452 under results, the ftp site no longer in existence. Please refer to this link instead DNA micro array supplemental data

 

Gelbart ME, Rechsteiner T, Richmond TJ, Tsukiyama T.

Interaction of Isw2 chromatin remodeling complex with nucleosomal arrays: analyses using recombinant yeast histones and immobilized templates.

Mol Cell Biol 2001, 21:2098-2106.

 

Goldmark JP, Fazzio TG, Estep PW, Church GM, Tsukiyama T.

The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p.

Cell 2000, 103:423-433.

 

Tsukiyama T, Palmer J, Landel CC, Shiloach J, Wu C.

Characterization of ISWI subfamily of ATP-dependent chromatin remodeling factors in S. cerevisiae.

Genes Dev 1999, 13:686-697.